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Greptile fixes: - Removed non-standard YAML frontmatter fields (observe, feedback, rollback) from all 4 skills — only name, description, origin, version per CONTRIBUTING.md - Added null guard to checkInteractions implementation (was missing despite test) - CI: replaced 2>/dev/null with 2>&1 (was silencing safety-critical errors) - CI: quoted $RESULT variable (was breaking jq on JSON with spaces) - CI: added division-by-zero guard when test suite is empty - CI: added note that Jest is reference implementation, thresholds are framework-agnostic
246 lines
9.1 KiB
Markdown
246 lines
9.1 KiB
Markdown
---
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name: healthcare-cdss-patterns
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description: Clinical Decision Support System (CDSS) development patterns. Drug interaction checking, dose validation, clinical scoring (NEWS2, qSOFA), alert severity classification, and integration into EMR workflows.
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origin: Health1 Super Speciality Hospitals — contributed by Dr. Keyur Patel
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version: "1.0.0"
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---
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# Healthcare CDSS Development Patterns
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Patterns for building Clinical Decision Support Systems that integrate into EMR workflows. CDSS modules are patient safety critical — zero tolerance for false negatives.
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## When to Use
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- Implementing drug interaction checking
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- Building dose validation engines
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- Implementing clinical scoring systems (NEWS2, qSOFA, APACHE, GCS)
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- Designing alert systems for abnormal clinical values
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- Building medication order entry with safety checks
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- Integrating lab result interpretation with clinical context
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## How It Works
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The CDSS engine is a **pure function library with zero side effects**. Input clinical data, output alerts. This makes it fully testable.
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Three primary modules:
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1. **`checkInteractions(newDrug, currentMeds, allergies)`** — Checks a new drug against current medications and known allergies. Returns severity-sorted `InteractionAlert[]`. Uses `DrugInteractionPair` data model.
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2. **`validateDose(drug, dose, route, weight, age, renalFunction)`** — Validates a prescribed dose against weight-based, age-adjusted, and renal-adjusted rules. Returns `DoseValidationResult`.
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3. **`calculateNEWS2(vitals)`** — National Early Warning Score 2 from `NEWS2Input`. Returns `NEWS2Result` with total score, risk level, and escalation guidance.
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```
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EMR UI
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↓ (user enters data)
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CDSS Engine (pure functions, no side effects)
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├── Drug Interaction Checker
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├── Dose Validator
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├── Clinical Scoring (NEWS2, qSOFA, etc.)
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└── Alert Classifier
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↓ (returns alerts)
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EMR UI (displays alerts inline, blocks if critical)
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```
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### Drug Interaction Checking
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```typescript
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interface DrugInteractionPair {
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drugA: string; // generic name
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drugB: string; // generic name
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severity: 'critical' | 'major' | 'minor';
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mechanism: string;
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clinicalEffect: string;
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recommendation: string;
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}
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function checkInteractions(
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newDrug: string,
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currentMedications: string[],
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allergyList: string[]
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): InteractionAlert[] {
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if (!newDrug) return [];
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const alerts: InteractionAlert[] = [];
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for (const current of currentMedications) {
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const interaction = findInteraction(newDrug, current);
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if (interaction) {
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alerts.push({ severity: interaction.severity, pair: [newDrug, current],
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message: interaction.clinicalEffect, recommendation: interaction.recommendation });
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}
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}
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for (const allergy of allergyList) {
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if (isCrossReactive(newDrug, allergy)) {
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alerts.push({ severity: 'critical', pair: [newDrug, allergy],
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message: `Cross-reactivity with documented allergy: ${allergy}`,
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recommendation: 'Do not prescribe without allergy consultation' });
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}
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}
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return alerts.sort((a, b) => severityOrder(a.severity) - severityOrder(b.severity));
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}
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```
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Interaction pairs must be **bidirectional**: if Drug A interacts with Drug B, then Drug B interacts with Drug A.
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### Dose Validation
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```typescript
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interface DoseValidationResult {
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valid: boolean;
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message: string;
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suggestedRange: { min: number; max: number; unit: string } | null;
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factors: string[];
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}
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function validateDose(
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drug: string,
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dose: number,
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route: 'oral' | 'iv' | 'im' | 'sc' | 'topical',
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patientWeight?: number,
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patientAge?: number,
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renalFunction?: number
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): DoseValidationResult {
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const rules = getDoseRules(drug, route);
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if (!rules) return { valid: true, message: 'No validation rules available', suggestedRange: null, factors: [] };
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const factors: string[] = [];
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// SAFETY: if rules require weight but weight missing, BLOCK (not pass)
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if (rules.weightBased) {
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if (!patientWeight || patientWeight <= 0) {
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return { valid: false, message: `Weight required for ${drug} (mg/kg drug)`,
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suggestedRange: null, factors: ['weight_missing'] };
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}
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factors.push('weight');
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const maxDose = rules.maxPerKg * patientWeight;
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if (dose > maxDose) {
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return { valid: false, message: `Dose exceeds max for ${patientWeight}kg`,
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suggestedRange: { min: rules.minPerKg * patientWeight, max: maxDose, unit: rules.unit }, factors };
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}
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}
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// Age-based adjustment (when rules define age brackets and age is provided)
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if (rules.ageAdjusted && patientAge !== undefined) {
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factors.push('age');
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const ageMax = rules.getAgeAdjustedMax(patientAge);
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if (dose > ageMax) {
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return { valid: false, message: `Exceeds age-adjusted max for ${patientAge}yr`,
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suggestedRange: { min: rules.typicalMin, max: ageMax, unit: rules.unit }, factors };
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}
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}
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// Renal adjustment (when rules define eGFR brackets and eGFR is provided)
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if (rules.renalAdjusted && renalFunction !== undefined) {
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factors.push('renal');
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const renalMax = rules.getRenalAdjustedMax(renalFunction);
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if (dose > renalMax) {
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return { valid: false, message: `Exceeds renal-adjusted max for eGFR ${renalFunction}`,
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suggestedRange: { min: rules.typicalMin, max: renalMax, unit: rules.unit }, factors };
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}
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}
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// Absolute max
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if (dose > rules.absoluteMax) {
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return { valid: false, message: `Exceeds absolute max ${rules.absoluteMax}${rules.unit}`,
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suggestedRange: { min: rules.typicalMin, max: rules.absoluteMax, unit: rules.unit },
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factors: [...factors, 'absolute_max'] };
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}
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return { valid: true, message: 'Within range',
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suggestedRange: { min: rules.typicalMin, max: rules.typicalMax, unit: rules.unit }, factors };
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}
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```
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### Clinical Scoring: NEWS2
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```typescript
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interface NEWS2Input {
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respiratoryRate: number; oxygenSaturation: number; supplementalOxygen: boolean;
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temperature: number; systolicBP: number; heartRate: number;
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consciousness: 'alert' | 'voice' | 'pain' | 'unresponsive';
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}
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interface NEWS2Result {
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total: number; // 0-20
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risk: 'low' | 'low-medium' | 'medium' | 'high';
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components: Record<string, number>;
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escalation: string;
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}
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```
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Scoring tables must match the Royal College of Physicians specification exactly.
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### Alert Severity and UI Behavior
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| Severity | UI Behavior | Clinician Action Required |
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|----------|-------------|--------------------------|
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| Critical | Block action. Non-dismissable modal. Red. | Must document override reason to proceed |
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| Major | Warning banner inline. Orange. | Must acknowledge before proceeding |
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| Minor | Info note inline. Yellow. | Awareness only, no action required |
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Critical alerts must NEVER be auto-dismissed or implemented as toast notifications. Override reasons must be stored in the audit trail.
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### Testing CDSS (Zero Tolerance for False Negatives)
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```typescript
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describe('CDSS — Patient Safety', () => {
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INTERACTION_PAIRS.forEach(({ drugA, drugB, severity }) => {
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it(`detects ${drugA} + ${drugB} (${severity})`, () => {
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const alerts = checkInteractions(drugA, [drugB], []);
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expect(alerts.length).toBeGreaterThan(0);
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expect(alerts[0].severity).toBe(severity);
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});
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it(`detects ${drugB} + ${drugA} (reverse)`, () => {
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const alerts = checkInteractions(drugB, [drugA], []);
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expect(alerts.length).toBeGreaterThan(0);
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});
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});
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it('blocks mg/kg drug when weight is missing', () => {
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const result = validateDose('gentamicin', 300, 'iv');
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expect(result.valid).toBe(false);
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expect(result.factors).toContain('weight_missing');
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});
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it('handles malformed drug data gracefully', () => {
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expect(() => checkInteractions('', [], [])).not.toThrow();
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});
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});
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```
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Pass criteria: 100%. A single missed interaction is a patient safety event.
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### Anti-Patterns
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- Making CDSS checks optional or skippable without documented reason
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- Implementing interaction checks as toast notifications
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- Using `any` types for drug or clinical data
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- Hardcoding interaction pairs instead of using a maintainable data structure
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- Silently catching errors in CDSS engine (must surface failures loudly)
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- Skipping weight-based validation when weight is not available (must block, not pass)
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## Examples
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### Example 1: Drug Interaction Check
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```typescript
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const alerts = checkInteractions('warfarin', ['aspirin', 'metformin'], ['penicillin']);
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// [{ severity: 'critical', pair: ['warfarin', 'aspirin'],
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// message: 'Increased bleeding risk', recommendation: 'Avoid combination' }]
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```
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### Example 2: Dose Validation
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```typescript
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const ok = validateDose('paracetamol', 1000, 'oral', 70, 45);
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// { valid: true, suggestedRange: { min: 500, max: 4000, unit: 'mg' } }
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const bad = validateDose('paracetamol', 5000, 'oral', 70, 45);
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// { valid: false, message: 'Exceeds absolute max 4000mg' }
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const noWeight = validateDose('gentamicin', 300, 'iv');
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// { valid: false, factors: ['weight_missing'] }
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```
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### Example 3: NEWS2 Scoring
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```typescript
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const result = calculateNEWS2({
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respiratoryRate: 24, oxygenSaturation: 93, supplementalOxygen: true,
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temperature: 38.5, systolicBP: 100, heartRate: 110, consciousness: 'voice'
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});
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// { total: 13, risk: 'high', escalation: 'Urgent clinical review. Consider ICU.' }
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```
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